Publications

Google Scholar page

Preprints

S. Sy, D. Chan, J. Zhang, J. Lyu, C. Feng, K. Wang, V. Mok, K. Wong, Y. Mu, O. Randlett, Y. Hu, H. Ko. Chemosensory modulation of eye-body coordination in larval zebrafish. bioRxiv. Link Download

P. Zhao, Y. Tong, I. Lazarte, B. Khan, T. Lam, Y. Hu* , J. Semmelhack*. The visuomotor transformations underlying target-directed behaviors. bioRxiv. Link Download

Z. Luo, K. Peng, Z. Liang, S. Cai, C. Xu, D. Li, Y. Hu, C. Zhou, Q. Liu. Mapping effective connectivity by virtually perturbing a surrogate brain. arXiv. Link Download

X. Lou, Y. Hu*, X. Li*. Learning Linear Polytree Structural Equation Models. arXiv. Link Download Code

Publications

Z. Wang#, W. Mai#, Y. Chai#, K. Qi, H. Ren, C. Shen, S. Zhang, Y. Hu* , Q Wen*. The Geometry and Dimensionality of Brain-wide Activity. eLife in revision. Link Download

S. Sy, D. Chan, R. Chan, J. Lyu, Z. Li, K. Wong, C. Choi, V. Mok, H. Lai, O. Randlett, Y. Hu, H. Ko. An optofluidic platform for interrogating chemosensory behavior and brainwide neural representation in larval zebrafish. Nature Communications. 2023. Link Download

Y. Hu and H. Sompolinsky. The spectrum of covariance matrices of randomly connected recurrent neuronal networks with linear dynamics. PLoS Comput Biol. 2022. Link Download

G. Si, J.K. Kanwal, Y. Hu, C.J. Tabone, J. Baron, M. Berck, G. Vignoud, A.D.T. Samuel. Structured odorant response patterns across a complete olfactory receptor neuron population. Neuron. 2019. Link Download

Y. Hu, S.L. Brunton, N. Cain, S. Mihalas, J.N. Kutz, and E. Shea-Brown. Feedback through graph motifs relates structure and function in complex networks. Phys. Rev. E. 2018. Link Download

X. Chen*, Y. Mu*, Y. Hu*, A. Kuan*, M. Nikitchenko, O. Randlett, A. B. Chen, J. Gavornik, H. Sompolinsky, F. Engert, M.B. Ahrens. Brainwide organization of neuronal activity and convergent sensorimotor transformations in larval zebrafish. Neuron. 2018. Link Download

G. Ocker*, Y. Hu*, M. Buice, B. Doiron, K. Josic, R. Rosenbaum and E. Shea-Brown. From the statistics of connectivity to the statistics of spike times in neuronal networks. Curr. Opin. Neurobio. 2017. Link Download

Y. Hu, J. Trousdale, K. Josic and E. Shea-Brown. Local paths to global coherence: cutting networks down to size. Phys. Rev. E 89(3): 032802. 2014. Link Download

Y. Hu, J. Zylberberg, and E. Shea-Brown. The sign rule and beyond: Boundary effects, flexibility, and optimal noise correlations in neural population codes. PLoS Comput. Biol. 10(2): e1003469. 2014. Link Download

J. Trousdale, Y. Hu, E. Shea-Brown and K. Josic. A generative spike train model with time- structured higher order correlations. Front. Comput. Neurosci. 7:84. 2013. Link Download

Y. Hu, J. Trousdale, K. Josic, and E. Shea-Brown. Motif Statistics and Spike Correlations in Neuronal Networks. J. Stat. Mech. P03012. 2013. Link Download

J. Trousdale, Y. Hu, E. Shea-Brown, and K. Josic. Impact of network structure and cellular response on spike time correlations. PLoS Comp. Biol. 8(3): e1002408. 2012. Link Download